BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011C10SP1|AL426189
(759 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig992 1502 0.0
>3x_Contig992
Length = 4146
Score = 1502 bits (757), Expect = 0.0
Identities = 758/759 (99%)
Strand = Plus / Minus
Query: 1 ctactaaacgcttttgatccacgaatgaaattttgacgacagcttcccagtctgctgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4056 ctactaaacgcttttgatccacgaatgaaattttgacgacagcttcccagtctgctgttt 3997
Query: 61 tgccatttagatccaactctacttcgttaggatagaagtccaagataggagagtgttcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3996 tgccatttagatccaactctacttcgttaggatagaagtccaagataggagagtgttcat 3937
Query: 121 catacatgagtggtctgtacacaactggaatcaaattctttgatctctcaggcaagacgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3936 catacatgagtggtctgtacacaactggaatcaaattctttgatctctcaggcaagacgg 3877
Query: 181 ccatcaattgttggaagggcttgaaaggctgtcccttgtgaaattctatgttctgatcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3876 ccatcaattgttggaagggcttgaaaggctgtcccttgtgaaattctatgttctgatcta 3817
Query: 241 tacctttgatcacatctgatatacgaggagcgtaatgatatctgtwataccaggaccaag 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3816 tacctttgatcacatctgatatacgaggagcgtaatgatatctgtaataccaggaccaag 3757
Query: 301 atggacatccacgataatagtagtataaaacccattgtaaacctccgacatagttttctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3756 atggacatccacgataatagtagtataaaacccattgtaaacctccgacatagttttctg 3697
Query: 361 tcatttcttttagactatcagtatcattgatggaaaaatctaatttatctttatagtatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3696 tcatttcttttagactatcagtatcattgatggaaaaatctaatttatctttatagtatt 3637
Query: 421 gatctttccactcaacgaatctctcgctataaatttcacgctcttcttctaattcttctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3636 gatctttccactcaacgaatctctcgctataaatttcacgctcttcttctaattcttctt 3577
Query: 481 cagatgcaataataataccttgttcatatttcttaatagaacgtcttgtttcgtgaatac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3576 cagatgcaataataataccttgttcatatttcttaatagaacgtcttgtttcgtgaatac 3517
Query: 541 gggcttcatgctcttcatctgtttcttgcacattgatggagtctaaatccaacttgaagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3516 gggcttcatgctcttcatctgtttcttgcacattgatggagtctaaatccaacttgaagt 3457
Query: 601 agtacaaatcttttgatttagaatgagcaagaattaaacccaaatcaaatgcgaattcct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3456 agtacaaatcttttgatttagaatgagcaagaattaaacccaaatcaaatgcgaattcct 3397
Query: 661 tcaagaaatccaggttggcccgaaccaattctttatcctcaagagggaaaatttcgaaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3396 tcaagaaatccaggttggcccgaaccaattctttatcctcaagagggaaaatttcgaaat 3337
Query: 721 cggcatcctgtaattcagaagtgaccttccgttgaacgg 759
|||||||||||||||||||||||||||||||||||||||
Sbjct: 3336 cggcatcctgtaattcagaagtgaccttccgttgaacgg 3298
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6540
Number of Sequences: 1807
Number of extensions: 6540
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 759
length of database: 10,358,551
effective HSP length: 16
effective length of query: 743
effective length of database: 10,329,639
effective search space: 7674921777
effective search space used: 7674921777
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)